Egan was born in Chicago, Illinois, which at the end of the 19th century was the focal point of golf in the United States — the first 18-hole golf course in the country, the Chicago Golf Club, in Wheaton, was built there in 1895. Egan played his first game of golf in Lake Geneva, Wisconsin at the age of 12. The school did not have a golf team, so Chandler developed his golf game at his father’s club, Exmoor Country Club. He attended Harvard University, where he soon became the captain of the college golf team. The team won three team NCAA Division I Men’s Golf Championships from 1902 to 1904, and Egan won the individual title in 1902.
Egan won the 1902 Western Amateur, which was played at the Chicago Golf Club. Not only was the tournament played in his home metropolitan area, but the defeated his cousin Walter Egan in the finals. A year later, the Egan cousins switched places with Walter winning and Chandler coming in second, and Chandler Egan would win the tournament again in 1904, 1905 (with Walter again the runner-up), and 1907.
In 1904, Egan achieved the heights of U.S. amateur golf success by winning the U.S. Amateur, played at Baltusrol Golf Club in New Jersey. He won back-to-back titles a year later at his home turf of the Chicago Golf Club.
Egan appeared to be peaking at the right time to also win an individual gold medal at the 1904 Summer Olympics, which featured golf for the last time in 1904. While Egan’s U.S. team (which also included cousin Walter) won team gold, Egan had to settle for individual silver, as he was defeated by Canadian George Lyon, who at 46, was more than twice Egan’s age. Egan later admitted he had been outclassed by the wily Lyon, whose massive drives forced Egan out of his usual game.
Following his runner-up finish in the 1909 U.S. Amateur, Egan quickly disappeared from competition . He reappeared in the news in May 1911 with his purchase of 115 acres of apple and pear orchard in Medford, Oregon. He reemerged on the competitive golf circuit in 1914, with a runner-up finish in the Pacific Northwest Amateur championship to Jack Neville. A year later, Egan and Neville would meet again, and this time, Egan was the winner. He would win the Pacific Northwest Amateur four more times, in 1920, 1923, 1925, and 1932. Egan won the California State Amateur in 1926. He played on two U.S. championship Walker Cup teams in 1930 and 1934.
In the 1910s, Egan was enamored with and worked in golf course design, designing such notable Oregon courses as the Eugene Country Club, Eastmoreland Golf Course, Oswego Lake Country Club, Riverside Golf & Country Club, Tualatin Country Club, and Waverley Country Club. In 1929, Egan partnered with legendary golf architect Alister MacKenzie to renovate Pebble Beach Golf Links for the 1929 U.S. Amateur, in which Egan played and reached the semifinals. In 1929 Egan also aided MacKenzie and Hunter during the design and construction of The Union League Golf and Country Club, now known as Green Hills Country Club in Millbrae, California. After Seth Raynor submitted plans to re-design Sequoyah Country Club in Oakland, California just prior his death in 1926, it was Egan who ultimately did a 1930 re-design there. He designed the Indian Canyon municipal course in Spokane, Washington in 1930, which opened in 1935.